03.08.2010 In this post i would like to demonstrate the ability of R to handle and classify image data with the help of ImageJ and Rserve bundled and implemented in Bio7. In general R is a very useful application for image analysis and plenty of “pure” R packages for image analysis are already available. But … Read more
19.07.2010 In the next release of Bio7 a Voronoi/Delauney calculation will be available in the Points panel. Here is a screenshot of the current implementation. The screenshot below shows a direct comparison between a Voronoi area plot of R (left: with package “tripack”) and the new Voronoi calculation of Bio7. The area results are the … Read more
09.06.2010 Some useful resources on the Internet are sometimes hard to find. Here i present some useful links for ImageJ and image analysis in general. Manual and Links General Manual: http://rsbweb.nih.gov/ij/docs/user-guide.pdf Resources: ImageJ Website: http://rsbweb.nih.gov/ij/ ImageJ plugins: http://rsb.info.nih.gov/ij/plugins/index.html ImageJ Tutorials: http://rsb.info.nih.gov/ij/docs/examples/index.html ImageJ Forum: http://n2.nabble.com/ImageJ-f588099.html ImageJ Wiki: http://imagejdocu.tudor.lu/doku.php ImageJ Video Tutorials: http://imagejdocu.tudor.lu/doku.php?id=video:start ImageJ Manual: http://www.macbiophotonics.ca/imagej/ Fiji … Read more
20.05.2010 Finally i was able to integrate the “p2” update manager into Bio7 which will be shipped with the next release. What i really like is that it is possible to integrate the git plugin for Eclipse. Here are some Screenshots of the results. In the third screenshot ImageJ sources were downloaded into the Bio7 … Read more
I found the following link very useful because it aggregates articles about R from different blogs. Many of the articles are interesting in relation to ecological modelling because they refer to new aspects of spatial analysis and environmental topics. Link: http://www.r-bloggers.com/